J4_9HMW_002

3D structure

PDB id

9HMW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Arabidopsis thaliana 80S ribosome OVAC mutant in complex with P- and E-site tRNAs and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.25 Å

Loop

Sequence

UAAG*CGCC*GAG*CGUCG

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HMW|1|A|U|183
9HMW|1|A|A|184
9HMW|1|A|A|185
9HMW|1|A|G|186
*
9HMW|1|A|C|202
9HMW|1|A|G|203
9HMW|1|A|C|204
9HMW|1|A|C|205
*
9HMW|1|A|G|209
9HMW|1|A|A|210
9HMW|1|A|G|211
*
9HMW|1|A|C|223
9HMW|1|A|G|224
9HMW|1|A|U|225
9HMW|1|A|C|226
9HMW|1|A|G|227

Current chains

Chain A

Ribosomal RNA 25S

Nearby chains

Chain BO

Large ribosomal subunit protein uL24z

Chain BT

Large ribosomal subunit protein uL4z