J4_9HY6_010
3D structure
- PDB id
- 9HY6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAG*CGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 9HY6|1|b|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9HY6|1|b|C|1833
9HY6|1|b|U|1834
9HY6|1|b|G|1835
*
9HY6|1|b|C|1905
9HY6|1|b|G|1906
*
9HY6|1|b|C|1924
9HY6|1|b|C|1925
9HY6|1|b|U|1926
9HY6|1|b|A|1927
9HY6|1|b|A|1928
9HY6|1|b|G|1929
9HY6|1|b|G|1930
9HY6|1|b|U|1931
9HY6|1|b|A|1932
9HY6|1|b|G|1933
*
9HY6|1|b|C|1967
9HY6|1|b|G|1968
9HY6|1|b|A|1969
9HY6|1|b|A|1970
9HY6|1|b|U|1971
9HY6|1|b|G|1972
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain A
- Transfer RNA; tRNA
- Chain c
- Large ribosomal subunit protein uL2
Coloring options: