J4_9I2E_001

3D structure

PDB id

9I2E (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human ribosome (combined translational states)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.95 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9I2E|1|L5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I2E|1|L5|C|111
9I2E|1|L5|C|112
*
9I2E|1|L5|G|278
9I2E|1|L5|A|279
9I2E|1|L5|G|280
9I2E|1|L5|U|281
9I2E|1|L5|C|282
9I2E|1|L5|G|283
*
9I2E|1|L5|C|304
9I2E|1|L5|A|305
9I2E|1|L5|A|306
9I2E|1|L5|A|307
9I2E|1|L5|G|308
9I2E|1|L5|C|309
9I2E|1|L5|G|310
*
9I2E|1|L5|U|327
9I2E|1|L5|A|328
9I2E|1|L5|A|329
9I2E|1|L5|G|330

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Li

60S ribosomal protein L36