J4_9I89_007

3D structure

PDB id

9I89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the A2058-dimethylated Staphylococcus aureus 70S ribosome complexed with clincelin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

AAG*UC*GGGAG*CGAGU

Length

15 nucleotides

Bulged bases

9I89|1|A|A|1489

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9I89|1|A|A|1488
9I89|1|A|A|1489
9I89|1|A|G|1490
*
9I89|1|A|U|1510
9I89|1|A|C|1511
*
9I89|1|A|G|1570
9I89|1|A|G|1571
9I89|1|A|G|1572
9I89|1|A|A|1573
9I89|1|A|G|1574
*
9I89|1|A|C|1590
9I89|1|A|G|1591
9I89|1|A|A|1592
9I89|1|A|G|1593
9I89|1|A|U|1594

Current chains

Chain A

23S ribosomal RNA

Nearby chains