J4_9J1M_010

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

9J1M|1|a|C|116

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|a|G|110
9J1M|1|a|A|111
9J1M|1|a|G|112
9J1M|1|a|U|113
9J1M|1|a|A|114
9J1M|1|a|A|115
9J1M|1|a|C|116
9J1M|1|a|A|117
9J1M|1|a|C|118
*
9J1M|1|a|G|237
9J1M|1|a|G|238
9J1M|1|a|C|239
*
9J1M|1|a|G|285
9J1M|1|a|U|286
9J1M|1|a|A|287
9J1M|1|a|G|288
*
9J1M|1|a|C|310
9J1M|1|a|C|311

Current chains

Chain a

16S rRNA

Nearby chains

Chain p

Small ribosomal subunit protein bS16

Chain q

Small ribosomal subunit protein uS17