J4_9J1M_011

3D structure

PDB id

9J1M (explore in PDB, NAKB, or RNA 3D Hub)

Description

KU13-bond Mycobacterium tuberculosis 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.33 Å

Loop

Sequence

UU*GAUAGGAC*GUGGAAAG*CG

Length

20 nucleotides

Bulged bases

9J1M|1|a|A|208

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9J1M|1|a|U|139
9J1M|1|a|U|140
*
9J1M|1|a|G|174
9J1M|1|a|A|175
9J1M|1|a|U|176
9J1M|1|a|A|177
9J1M|1|a|G|178
9J1M|1|a|G|179
9J1M|1|a|A|180
9J1M|1|a|C|181
*
9J1M|1|a|G|202
9J1M|1|a|U|203
9J1M|1|a|G|204
9J1M|1|a|G|205
9J1M|1|a|A|206
9J1M|1|a|A|207
9J1M|1|a|A|208
9J1M|1|a|G|209
*
9J1M|1|a|C|218
9J1M|1|a|G|219

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

Small ribosomal subunit protein uS17

Chain t

Small ribosomal subunit protein bS20