J4_9JNS_001

3D structure

PDB id

9JNS (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CCAG*CGAUGAGUAG*UGAAUAUG*CAAG

Length

26 nucleotides

Bulged bases

9JNS|1|A|U|369, 9JNS|1|A|G|372, 9JNS|1|A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JNS|1|A|C|268
9JNS|1|A|C|269
9JNS|1|A|A|270
9JNS|1|A|G|271
*
9JNS|1|A|C|366
9JNS|1|A|G|367
9JNS|1|A|A|368
9JNS|1|A|U|369
9JNS|1|A|G|370
9JNS|1|A|A|371
9JNS|1|A|G|372
9JNS|1|A|U|373
9JNS|1|A|A|374
9JNS|1|A|G|375
*
9JNS|1|A|U|399
9JNS|1|A|G|400
9JNS|1|A|A|401
9JNS|1|A|A|402
9JNS|1|A|U|403
9JNS|1|A|A|404
9JNS|1|A|U|405
9JNS|1|A|G|406
*
9JNS|1|A|C|421
9JNS|1|A|A|422
9JNS|1|A|A|423
9JNS|1|A|G|424

Current chains

Chain A

23S ribosomal RNA

Nearby chains