J4_9JNS_002

3D structure

PDB id

9JNS (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CAAG*CGAAG*CGAG*CGUUAAG

Length

20 nucleotides

Bulged bases

9JNS|1|A|A|654

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JNS|1|A|C|601
9JNS|1|A|A|602
9JNS|1|A|A|603
9JNS|1|A|G|604
*
9JNS|1|A|C|624
9JNS|1|A|G|625
9JNS|1|A|A|626
9JNS|1|A|A|627
9JNS|1|A|G|628
*
9JNS|1|A|C|635
9JNS|1|A|G|636
9JNS|1|A|A|637
9JNS|1|A|G|638
*
9JNS|1|A|C|650
9JNS|1|A|G|651
9JNS|1|A|U|652
9JNS|1|A|U|653
9JNS|1|A|A|654
9JNS|1|A|A|655
9JNS|1|A|G|656

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain L

50S ribosomal protein L15