J4_9JNS_004

3D structure

PDB id

9JNS (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGUUC*GGUGAG*CUU*AAAUCGUAC

Length

23 nucleotides

Bulged bases

9JNS|1|A|G|1311, 9JNS|1|A|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JNS|1|A|G|1310
9JNS|1|A|G|1311
9JNS|1|A|U|1312
9JNS|1|A|U|1313
9JNS|1|A|C|1314
*
9JNS|1|A|G|1338
9JNS|1|A|G|1339
9JNS|1|A|U|1340
9JNS|1|A|G|1341
9JNS|1|A|A|1342
9JNS|1|A|G|1343
*
9JNS|1|A|C|1404
9JNS|1|A|U|1405
9JNS|1|A|U|1406
*
9JNS|1|A|A|1596
9JNS|1|A|A|1597
9JNS|1|A|A|1598
9JNS|1|A|U|1599
9JNS|1|A|C|1600
9JNS|1|A|G|1601
9JNS|1|A|U|1602
9JNS|1|A|A|1603
9JNS|1|A|C|1604

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23