J4_9JNS_006

3D structure

PDB id

9JNS (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-II)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGGCUGC*GUGGAC*GGAAG*UGC

Length

21 nucleotides

Bulged bases

9JNS|1|A|A|2675

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JNS|1|A|G|2643
9JNS|1|A|G|2644
9JNS|1|A|G|2645
9JNS|1|A|C|2646
9JNS|1|A|U|2647
9JNS|1|A|G|2648
9JNS|1|A|C|2649
*
9JNS|1|A|G|2671
9JNS|1|A|U|2672
9JNS|1|A|G|2673
9JNS|1|A|G|2674
9JNS|1|A|A|2675
9JNS|1|A|C|2676
*
9JNS|1|A|G|2731
9JNS|1|A|G|2732
9JNS|1|A|A|2733
9JNS|1|A|A|2734
9JNS|1|A|G|2735
*
9JNS|1|A|U|2769
9JNS|1|A|G|2770
9JNS|1|A|C|2771

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain C

rRNA adenine N-6-methyltransferase

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

50S ribosomal protein L14