J4_9JSR_001

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CCAG*CGAUGAGUAG*UGAAUAUG*CAAG

Length

26 nucleotides

Bulged bases

9JSR|1|A|U|369, 9JSR|1|A|G|372, 9JSR|1|A|A|404, 9JSR|1|A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JSR|1|A|C|268
9JSR|1|A|C|269
9JSR|1|A|A|270
9JSR|1|A|G|271
*
9JSR|1|A|C|366
9JSR|1|A|G|367
9JSR|1|A|A|368
9JSR|1|A|U|369
9JSR|1|A|G|370
9JSR|1|A|A|371
9JSR|1|A|G|372
9JSR|1|A|U|373
9JSR|1|A|A|374
9JSR|1|A|G|375
*
9JSR|1|A|U|399
9JSR|1|A|G|400
9JSR|1|A|A|401
9JSR|1|A|A|402
9JSR|1|A|U|403
9JSR|1|A|A|404
9JSR|1|A|U|405
9JSR|1|A|G|406
*
9JSR|1|A|C|421
9JSR|1|A|A|422
9JSR|1|A|A|423
9JSR|1|A|G|424

Current chains

Chain A

23S Ribosomal RNA

Nearby chains