J4_9JSR_004

3D structure

PDB id

9JSR (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S precursor - Erm complex (C-I)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GGUUC*GGUGAG*CUU*AAAUCGUAC

Length

23 nucleotides

Bulged bases

9JSR|1|A|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9JSR|1|A|G|1310
9JSR|1|A|G|1311
9JSR|1|A|U|1312
9JSR|1|A|U|1313
9JSR|1|A|C|1314
*
9JSR|1|A|G|1338
9JSR|1|A|G|1339
9JSR|1|A|U|1340
9JSR|1|A|G|1341
9JSR|1|A|A|1342
9JSR|1|A|G|1343
*
9JSR|1|A|C|1404
9JSR|1|A|U|1405
9JSR|1|A|U|1406
*
9JSR|1|A|A|1596
9JSR|1|A|A|1597
9JSR|1|A|A|1598
9JSR|1|A|U|1599
9JSR|1|A|C|1600
9JSR|1|A|G|1601
9JSR|1|A|U|1602
9JSR|1|A|A|1603
9JSR|1|A|C|1604

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain T

50S ribosomal protein L23