3D structure

PDB id
9JSR (explore in PDB, NAKB, or RNA 3D Hub)
Description
50S precursor - Erm complex (C-I)
Experimental method
ELECTRON MICROSCOPY
Resolution
4 Å

Loop

Sequence
GGGCUG*UGGAC*GGAAG*UGC
Length
19 nucleotides
Bulged bases
9JSR|1|A|A|2675
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9JSR|1|A|G|2643
9JSR|1|A|G|2644
9JSR|1|A|G|2645
9JSR|1|A|C|2646
9JSR|1|A|U|2647
9JSR|1|A|G|2648
*
9JSR|1|A|U|2672
9JSR|1|A|G|2673
9JSR|1|A|G|2674
9JSR|1|A|A|2675
9JSR|1|A|C|2676
*
9JSR|1|A|G|2731
9JSR|1|A|G|2732
9JSR|1|A|A|2733
9JSR|1|A|A|2734
9JSR|1|A|G|2735
*
9JSR|1|A|U|2769
9JSR|1|A|G|2770
9JSR|1|A|C|2771

Current chains

Chain A
23S Ribosomal RNA

Nearby chains

Chain C
rRNA adenine N-6-methyltransferase
Chain D
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain K
50S ribosomal protein L14

Coloring options:

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