J4_9K0Z_004
3D structure
- PDB id
- 9K0Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EF-G2 bound 70S ribosome complex of M. smegmatis
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAG*CGAAAG*CCGUAAACGGUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 9K0Z|1|A|A|556, 9K0Z|1|A|A|795
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9K0Z|1|A|G|555
9K0Z|1|A|A|556
9K0Z|1|A|G|557
*
9K0Z|1|A|C|744
9K0Z|1|A|G|745
9K0Z|1|A|A|746
9K0Z|1|A|A|747
9K0Z|1|A|A|748
9K0Z|1|A|G|749
*
9K0Z|1|A|C|790
9K0Z|1|A|C|791
9K0Z|1|A|G|792
9K0Z|1|A|U|793
9K0Z|1|A|A|794
9K0Z|1|A|A|795
9K0Z|1|A|A|796
9K0Z|1|A|C|797
9K0Z|1|A|G|798
9K0Z|1|A|G|799
9K0Z|1|A|U|800
9K0Z|1|A|G|801
*
9K0Z|1|A|C|861
9K0Z|1|A|C|862
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain H
- Small ribosomal subunit protein uS8
- Chain L
- Small ribosomal subunit protein uS12
- Chain O
- Small ribosomal subunit protein uS15
- Chain Q
- Small ribosomal subunit protein uS17
- Chain h
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: