J4_9K0Z_008

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GGUUC*GGUGAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

9K0Z|1|h|G|1456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|G|1425
9K0Z|1|h|G|1426
9K0Z|1|h|U|1427
9K0Z|1|h|U|1428
9K0Z|1|h|C|1429
*
9K0Z|1|h|G|1453
9K0Z|1|h|G|1454
9K0Z|1|h|U|1455
9K0Z|1|h|G|1456
9K0Z|1|h|A|1457
9K0Z|1|h|G|1458
*
9K0Z|1|h|C|1519
9K0Z|1|h|C|1520
*
9K0Z|1|h|G|1815
9K0Z|1|h|C|1816
9K0Z|1|h|C|1817
9K0Z|1|h|C|1818
9K0Z|1|h|G|1819
9K0Z|1|h|U|1820
9K0Z|1|h|A|1821
9K0Z|1|h|C|1822

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain U

Large ribosomal subunit protein uL23

Chain d

Large ribosomal subunit protein bL34