J4_9K0Z_011

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

GACUG*CACAG*UGAC*GUAAC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|G|1989
9K0Z|1|h|A|1990
9K0Z|1|h|C|1991
9K0Z|1|h|U|1992
9K0Z|1|h|G|1993
*
9K0Z|1|h|C|2005
9K0Z|1|h|A|2006
9K0Z|1|h|C|2007
9K0Z|1|h|A|2008
9K0Z|1|h|G|2009
*
9K0Z|1|h|U|2044
9K0Z|1|h|G|2045
9K0Z|1|h|A|2046
9K0Z|1|h|C|2047
*
9K0Z|1|h|G|2199
9K0Z|1|h|U|2200
9K0Z|1|h|A|2201
9K0Z|1|h|A|2202
9K0Z|1|h|C|2203

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain A

Small subunit ribosomal RNA; SSU rRNA

Chain i

Large ribosomal subunit protein uL2