J4_9K10_001

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*UAAG

Length

19 nucleotides

Bulged bases

9K10|1|A|U|316, 9K10|1|A|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|C|269
9K10|1|A|U|270
9K10|1|A|A|271
9K10|1|A|A|272
9K10|1|A|A|273
9K10|1|A|C|274
*
9K10|1|A|G|312
9K10|1|A|G|313
9K10|1|A|G|314
9K10|1|A|U|315
9K10|1|A|U|316
9K10|1|A|G|317
*
9K10|1|A|C|492
9K10|1|A|U|493
9K10|1|A|G|494
*
9K10|1|A|U|509
9K10|1|A|A|510
9K10|1|A|A|511
9K10|1|A|G|512

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9