J4_9K10_006

3D structure

PDB id

9K10 (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 50S ribosome subunit complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K10|1|A|G|1664
9K10|1|A|U|1665
9K10|1|A|A|1666
9K10|1|A|C|1667
*
9K10|1|A|G|1686
9K10|1|A|G|1687
9K10|1|A|G|1688
*
9K10|1|A|C|1747
9K10|1|A|A|1748
9K10|1|A|U|1749
9K10|1|A|A|1750
9K10|1|A|G|1751
*
9K10|1|A|C|1762
9K10|1|A|G|1763
9K10|1|A|A|1764
9K10|1|A|A|1765
9K10|1|A|U|1766
9K10|1|A|U|1767
9K10|1|A|C|1768

Current chains

Chain A

23S ribosomal RNA

Nearby chains