J4_9L0R_012
3D structure
- PDB id
- 9L0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Streptococcus agalactiae GOLLD RNA dodecamer
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.72 Å
Loop
- Sequence
- CGAAAGUGUGCUUCG*CU*AAA*UUAGUAG
- Length
- 27 nucleotides
- Bulged bases
- 9L0R|1|F|A|457, 9L0R|1|F|U|465, 9L0R|1|F|C|466
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9L0R|1|F|C|453
9L0R|1|F|G|454
9L0R|1|F|A|455
9L0R|1|F|A|456
9L0R|1|F|A|457
9L0R|1|F|G|458
9L0R|1|F|U|459
9L0R|1|F|G|460
9L0R|1|F|U|461
9L0R|1|F|G|462
9L0R|1|F|C|463
9L0R|1|F|U|464
9L0R|1|F|U|465
9L0R|1|F|C|466
9L0R|1|F|G|467
*
9L0R|1|F|C|481
9L0R|1|F|U|482
*
9L0R|1|F|A|508
9L0R|1|F|A|509
9L0R|1|F|A|510
*
9L0R|1|F|U|568
9L0R|1|F|U|569
9L0R|1|F|A|570
9L0R|1|F|G|571
9L0R|1|F|U|572
9L0R|1|F|A|573
9L0R|1|F|G|574
Current chains
- Chain F
- RNA (700-MER)
Nearby chains
- Chain E
- Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA
Coloring options: