J4_9LHL_041

3D structure

PDB id

9LHL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Composite map of Env38-Golld RNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UUAACA*UAAGA*UCCUU*AUGAA

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9LHL|1|N|U|293
9LHL|1|N|U|294
9LHL|1|N|A|295
9LHL|1|N|A|296
9LHL|1|N|C|297
9LHL|1|N|A|298
*
9LHL|1|N|U|323
9LHL|1|N|A|324
9LHL|1|N|A|325
9LHL|1|N|G|326
9LHL|1|N|A|327
*
9LHL|1|N|U|353
9LHL|1|N|C|354
9LHL|1|N|C|355
9LHL|1|N|U|356
9LHL|1|N|U|357
*
9LHL|1|N|A|383
9LHL|1|N|U|384
9LHL|1|N|G|385
9LHL|1|N|A|386
9LHL|1|N|A|387

Current chains

Chain N

Env38-Golld RNA

Nearby chains

Chain M

Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA