J4_9M0P_005

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GACUG*CAAAG*UGAUU*AUGAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|L5|G|3634
9M0P|1|L5|A|3635
9M0P|1|L5|C|3636
9M0P|1|L5|U|3637
9M0P|1|L5|G|3638
*
9M0P|1|L5|C|3650
9M0P|1|L5|A|3651
9M0P|1|L5|A|3652
9M0P|1|L5|A|3653
9M0P|1|L5|G|3654
*
9M0P|1|L5|U|3690
9M0P|1|L5|G|3691
9M0P|1|L5|A|3692
9M0P|1|L5|U|3693
9M0P|1|L5|U|3694
*
9M0P|1|L5|A|3821
9M0P|1|L5|U|3822
9M0P|1|L5|G|3823
9M0P|1|L5|A|3824
9M0P|1|L5|A|3825
9M0P|1|L5|C|3826

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Ln

60S ribosomal protein L41

Chain Lp

60S ribosomal protein L37a

Chain S2

18S ribosomal RNA|HOMO SAPIENS