J4_9M0P_006

3D structure

PDB id

9M0P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of human 80S ribosome in complex with montanine

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUG*CGGG*CUCUUAAGGUAG*UGAAUG

Length

25 nucleotides

Bulged bases

9M0P|1|L5|U|3818

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9M0P|1|L5|C|3696
9M0P|1|L5|U|3697
9M0P|1|L5|G|3698
*
9M0P|1|L5|C|3752
9M0P|1|L5|G|3753
9M0P|1|L5|G|3754
9M0P|1|L5|G|3755
*
9M0P|1|L5|C|3769
9M0P|1|L5|U|3770
9M0P|1|L5|C|3771
9M0P|1|L5|U|3772
9M0P|1|L5|U|3773
9M0P|1|L5|A|3774
9M0P|1|L5|A|3775
9M0P|1|L5|G|3776
9M0P|1|L5|G|3777
9M0P|1|L5|U|3778
9M0P|1|L5|A|3779
9M0P|1|L5|G|3780
*
9M0P|1|L5|U|3814
9M0P|1|L5|G|3815
9M0P|1|L5|A|3816
9M0P|1|L5|A|3817
9M0P|1|L5|U|3818
9M0P|1|L5|G|3819

Current chains

Chain L5

28S ribosomal RNA|HOMO SAPIENS

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Ln

60S ribosomal protein L41

Chain S2

18S ribosomal RNA|HOMO SAPIENS