J4_9MEE_014

3D structure

PDB id

9MEE (explore in PDB, NAKB, or RNA 3D Hub)

Description

GOLLD RNA nanocage (env-38)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUAACA*UAAG*CC*GAA

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MEE|1|E|U|293
9MEE|1|E|U|294
9MEE|1|E|A|295
9MEE|1|E|A|296
9MEE|1|E|C|297
9MEE|1|E|A|298
*
9MEE|1|E|U|323
9MEE|1|E|A|324
9MEE|1|E|A|325
9MEE|1|E|G|326
*
9MEE|1|E|C|354
9MEE|1|E|C|355
*
9MEE|1|E|G|385
9MEE|1|E|A|386
9MEE|1|E|A|387

Current chains

Chain E

GOLLD RNA nanocage

Nearby chains

Chain F

Giant, ornate, lake- and Lactobacillales-derived (GOLLD) RNA