J4_9MNC_005
3D structure
- PDB id
- 9MNC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome bound to small molecule SW393071
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.33 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 9MNC|1|L5|C|2437
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9MNC|1|L5|G|2406
9MNC|1|L5|G|2407
9MNC|1|L5|U|2408
9MNC|1|L5|U|2409
9MNC|1|L5|C|2410
*
9MNC|1|L5|G|2434
9MNC|1|L5|G|2435
9MNC|1|L5|U|2436
9MNC|1|L5|C|2437
9MNC|1|L5|A|2438
9MNC|1|L5|G|2439
*
9MNC|1|L5|U|2538
9MNC|1|L5|C|2539
*
9MNC|1|L5|G|2777
9MNC|1|L5|G|2778
9MNC|1|L5|C|2779
9MNC|1|L5|C|2780
9MNC|1|L5|G|2781
9MNC|1|L5|U|2782
9MNC|1|L5|A|2783
9MNC|1|L5|C|2784
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain L1
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain LP
- Large ribosomal subunit protein eL37
- Chain LR
- Large ribosomal subunit protein eL19
- Chain LU
- Large ribosomal subunit protein eL39
- Chain Lg
- Large ribosomal subunit protein eL34
- Chain Lk
- Large ribosomal subunit protein eL38
- Chain Ln
- Large ribosomal subunit protein uL23
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