3D structure

PDB id
9MTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
CGAAG*CGCC*GAG*CGUAG
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MTP|1|1A|C|297
9MTP|1|1A|G|298
9MTP|1|1A|A|299
9MTP|1|1A|A|300
9MTP|1|1A|G|301
*
9MTP|1|1A|C|316
9MTP|1|1A|G|317
9MTP|1|1A|C|318
9MTP|1|1A|C|319
*
9MTP|1|1A|G|323
9MTP|1|1A|A|324
9MTP|1|1A|G|325
*
9MTP|1|1A|C|337
9MTP|1|1A|G|338
9MTP|1|1A|U|339
9MTP|1|1A|A|340
9MTP|1|1A|G|341

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1F
50S ribosomal protein L4
Chain 1Y
50S ribosomal protein L24

Coloring options:

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