J4_9MTP_022

3D structure

PDB id

9MTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

UUG*CG*CCUAAGGUAG*CGAAAA

Length

21 nucleotides

Bulged bases

9MTP|1|2A|A|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTP|1|2A|U|1833
9MTP|1|2A|U|1834
9MTP|1|2A|G|1835
*
9MTP|1|2A|C|1905
9MTP|1|2A|G|1906
*
9MTP|1|2A|C|1924
9MTP|1|2A|C|1925
9MTP|1|2A|U|1926
9MTP|1|2A|A|1927
9MTP|1|2A|A|1928
9MTP|1|2A|G|1929
9MTP|1|2A|G|1930
9MTP|1|2A|U|1931
9MTP|1|2A|A|1932
9MTP|1|2A|G|1933
*
9MTP|1|2A|C|1967
9MTP|1|2A|G|1968
9MTP|1|2A|A|1969
9MTP|1|2A|A|1970
9MTP|1|2A|A|1971
9MTP|1|2A|A|1972

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2D

50S ribosomal protein L2

Chain 2a

Small subunit ribosomal RNA; SSU rRNA

Chain 2x

Transfer RNA; tRNA