3D structure

PDB id
9MTP (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.4 Å

Loop

Sequence
GAGUAACG*UC*GUAG*CC
Length
16 nucleotides
Bulged bases
9MTP|1|2a|C|121
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9MTP|1|2a|G|115
9MTP|1|2a|A|116
9MTP|1|2a|G|117
9MTP|1|2a|U|118
9MTP|1|2a|A|119
9MTP|1|2a|A|120
9MTP|1|2a|C|121
9MTP|1|2a|G|122
*
9MTP|1|2a|U|239
9MTP|1|2a|C|240
*
9MTP|1|2a|G|286
9MTP|1|2a|U|287
9MTP|1|2a|A|288
9MTP|1|2a|G|289
*
9MTP|1|2a|C|311
9MTP|1|2a|C|312

Current chains

Chain 2a
16S Ribosomal RNA

Nearby chains

Chain 2p
30S ribosomal protein S16
Chain 2q
30S ribosomal protein S17

Coloring options:

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