J4_9MTP_026

3D structure

PDB id

9MTP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTP|1|2a|G|142
9MTP|1|2a|A|143
9MTP|1|2a|G|144
*
9MTP|1|2a|C|178
9MTP|1|2a|A|179
9MTP|1|2a|U|180
9MTP|1|2a|G|181
9MTP|1|2a|U|182
9MTP|1|2a|G|183
*
9MTP|1|2a|C|194
9MTP|1|2a|A|195
9MTP|1|2a|A|196
9MTP|1|2a|A|197
9MTP|1|2a|G|198
*
9MTP|1|2a|C|219
9MTP|1|2a|G|220
9MTP|1|2a|C|221

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2t

30S ribosomal protein S20