J4_9MTQ_001

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CU*GAGUAC*GGAAUCUG*UAAG

Length

20 nucleotides

Bulged bases

9MTQ|1|1A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|1A|C|268
9MTQ|1|1A|U|269
*
9MTQ|1|1A|G|370
9MTQ|1|1A|A|371
9MTQ|1|1A|G|372
9MTQ|1|1A|U|373
9MTQ|1|1A|A|374
9MTQ|1|1A|C|375
*
9MTQ|1|1A|G|399
9MTQ|1|1A|G|400
9MTQ|1|1A|A|401
9MTQ|1|1A|A|402
9MTQ|1|1A|U|403
9MTQ|1|1A|C|404
9MTQ|1|1A|U|405
9MTQ|1|1A|G|406
*
9MTQ|1|1A|U|421
9MTQ|1|1A|A|422
9MTQ|1|1A|A|423
9MTQ|1|1A|G|424

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L28

Chain 1I

50S ribosomal protein L9