J4_9MTQ_008

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

UUG*CG*CCUAAGGUAG*CGAAAA

Length

21 nucleotides

Bulged bases

9MTQ|1|1A|A|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|1A|U|1833
9MTQ|1|1A|U|1834
9MTQ|1|1A|G|1835
*
9MTQ|1|1A|C|1905
9MTQ|1|1A|G|1906
*
9MTQ|1|1A|C|1924
9MTQ|1|1A|C|1925
9MTQ|1|1A|U|1926
9MTQ|1|1A|A|1927
9MTQ|1|1A|A|1928
9MTQ|1|1A|G|1929
9MTQ|1|1A|G|1930
9MTQ|1|1A|U|1931
9MTQ|1|1A|A|1932
9MTQ|1|1A|G|1933
*
9MTQ|1|1A|C|1967
9MTQ|1|1A|G|1968
9MTQ|1|1A|A|1969
9MTQ|1|1A|A|1970
9MTQ|1|1A|A|1971
9MTQ|1|1A|A|1972

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1D

50S ribosomal protein L2

Chain 1a

Small subunit ribosomal RNA; SSU rRNA

Chain 1x

Transfer RNA; tRNA