J4_9MTQ_009

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CAAAG*CUGAC*GGG*CGG

Length

16 nucleotides

Bulged bases

9MTQ|1|1A|A|2288

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|1A|C|2285
9MTQ|1|1A|A|2286
9MTQ|1|1A|A|2287
9MTQ|1|1A|A|2288
9MTQ|1|1A|G|2289
*
9MTQ|1|1A|C|2343
9MTQ|1|1A|U|2344
9MTQ|1|1A|G|2345
9MTQ|1|1A|A|2346
9MTQ|1|1A|C|2347
*
9MTQ|1|1A|G|2370
9MTQ|1|1A|G|2371
9MTQ|1|1A|G|2372
*
9MTQ|1|1A|C|2381
9MTQ|1|1A|G|2382
9MTQ|1|1A|G|2383

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 10

50S ribosomal protein L27

Chain 16

50S ribosomal protein L33

Chain 18

50S ribosomal protein L35

Chain 1G

50S ribosomal protein L5

Chain 1S

50S ribosomal protein L18