J4_9MTQ_025

3D structure

PDB id

9MTQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGD-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GAGUAACG*UC*GUAG*CC

Length

16 nucleotides

Bulged bases

9MTQ|1|2a|C|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTQ|1|2a|G|115
9MTQ|1|2a|A|116
9MTQ|1|2a|G|117
9MTQ|1|2a|U|118
9MTQ|1|2a|A|119
9MTQ|1|2a|A|120
9MTQ|1|2a|C|121
9MTQ|1|2a|G|122
*
9MTQ|1|2a|U|239
9MTQ|1|2a|C|240
*
9MTQ|1|2a|G|286
9MTQ|1|2a|U|287
9MTQ|1|2a|A|288
9MTQ|1|2a|G|289
*
9MTQ|1|2a|C|311
9MTQ|1|2a|C|312

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2p

30S ribosomal protein S16

Chain 2q

30S ribosomal protein S17