J4_9MTR_002

3D structure

PDB id

9MTR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site GGS-mutant Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGAAG*CGCC*GAG*CGUAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTR|1|1A|C|297
9MTR|1|1A|G|298
9MTR|1|1A|A|299
9MTR|1|1A|A|300
9MTR|1|1A|G|301
*
9MTR|1|1A|C|316
9MTR|1|1A|G|317
9MTR|1|1A|C|318
9MTR|1|1A|C|319
*
9MTR|1|1A|G|323
9MTR|1|1A|A|324
9MTR|1|1A|G|325
*
9MTR|1|1A|C|337
9MTR|1|1A|G|338
9MTR|1|1A|U|339
9MTR|1|1A|A|340
9MTR|1|1A|G|341

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1F

50S ribosomal protein L4

Chain 1Y

50S ribosomal protein L24