J4_9MTS_003

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

CGAUAAA*UC*GCGC*GG

Length

15 nucleotides

Bulged bases

9MTS|1|1A|G|1271, 9MTS|1|1A|A|1272, 9MTS|1|1A|U|1273, 9MTS|1|1A|A|1275, 9MTS|1|1A|G|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTS|1|1A|C|1270
9MTS|1|1A|G|1271
9MTS|1|1A|A|1272
9MTS|1|1A|U|1273
9MTS|1|1A|A|1274
9MTS|1|1A|A|1275
9MTS|1|1A|A|1276
*
9MTS|1|1A|U|1294
9MTS|1|1A|C|1295
*
9MTS|1|1A|G|1645
9MTS|1|1A|C|1646
9MTS|1|1A|G|1647
9MTS|1|1A|C|1648
*
9MTS|1|1A|G|2009
9MTS|1|1A|G|2010

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 15

50S ribosomal protein L32

Chain 1R

50S ribosomal protein L17

Chain 1W

50S ribosomal protein L22