J4_9MTS_008

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UUG*CG*CCUAAGGUAG*CGAAAA

Length

21 nucleotides

Bulged bases

9MTS|1|1A|A|1971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTS|1|1A|U|1833
9MTS|1|1A|U|1834
9MTS|1|1A|G|1835
*
9MTS|1|1A|C|1905
9MTS|1|1A|G|1906
*
9MTS|1|1A|C|1924
9MTS|1|1A|C|1925
9MTS|1|1A|U|1926
9MTS|1|1A|A|1927
9MTS|1|1A|A|1928
9MTS|1|1A|G|1929
9MTS|1|1A|G|1930
9MTS|1|1A|U|1931
9MTS|1|1A|A|1932
9MTS|1|1A|G|1933
*
9MTS|1|1A|C|1967
9MTS|1|1A|G|1968
9MTS|1|1A|A|1969
9MTS|1|1A|A|1970
9MTS|1|1A|A|1971
9MTS|1|1A|A|1972

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1D

50S ribosomal protein L2

Chain 1a

Small subunit ribosomal RNA; SSU rRNA

Chain 1x

Transfer RNA; tRNA