J4_9MTS_012

3D structure

PDB id

9MTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-unmodified Release Factor 1, and P-site fMEAAAKC-peptidyl-tRNAcys at 2.70A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

9MTS|1|1a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTS|1|1a|G|142
9MTS|1|1a|A|143
9MTS|1|1a|G|144
*
9MTS|1|1a|C|178
9MTS|1|1a|A|179
9MTS|1|1a|U|180
9MTS|1|1a|G|181
9MTS|1|1a|U|182
9MTS|1|1a|G|183
*
9MTS|1|1a|C|194
9MTS|1|1a|A|195
9MTS|1|1a|A|196
9MTS|1|1a|A|197
9MTS|1|1a|G|198
*
9MTS|1|1a|C|219
9MTS|1|1a|G|220
9MTS|1|1a|C|221

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1t

30S ribosomal protein S20