J4_9MTT_004

3D structure

PDB id

9MTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGUUC*GGUUAG*CU*ACCCGUAC

Length

21 nucleotides

Bulged bases

9MTT|1|1A|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTT|1|1A|G|1310
9MTT|1|1A|G|1311
9MTT|1|1A|U|1312
9MTT|1|1A|U|1313
9MTT|1|1A|C|1314
*
9MTT|1|1A|G|1338
9MTT|1|1A|G|1339
9MTT|1|1A|U|1340
9MTT|1|1A|U|1341
9MTT|1|1A|A|1342
9MTT|1|1A|G|1343
*
9MTT|1|1A|C|1404
9MTT|1|1A|U|1405
*
9MTT|1|1A|A|1597
9MTT|1|1A|C|1598
9MTT|1|1A|C|1599
9MTT|1|1A|C|1600
9MTT|1|1A|G|1601
9MTT|1|1A|U|1602
9MTT|1|1A|A|1603
9MTT|1|1A|C|1604

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 17

50S ribosomal protein L34

Chain 1X

50S ribosomal protein L23