J4_9MTT_015

3D structure

PDB id

9MTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

CU*GAGUAC*GGAAUCUG*UAAG

Length

20 nucleotides

Bulged bases

9MTT|1|2A|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTT|1|2A|C|268
9MTT|1|2A|U|269
*
9MTT|1|2A|G|370
9MTT|1|2A|A|371
9MTT|1|2A|G|372
9MTT|1|2A|U|373
9MTT|1|2A|A|374
9MTT|1|2A|C|375
*
9MTT|1|2A|G|399
9MTT|1|2A|G|400
9MTT|1|2A|A|401
9MTT|1|2A|A|402
9MTT|1|2A|U|403
9MTT|1|2A|C|404
9MTT|1|2A|U|405
9MTT|1|2A|G|406
*
9MTT|1|2A|U|421
9MTT|1|2A|A|422
9MTT|1|2A|A|423
9MTT|1|2A|G|424

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 21

50S ribosomal protein L28

Chain 2I

50S ribosomal protein L9