J4_9MTT_027

3D structure

PDB id

9MTT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site deacylated-tRNAcys at 2.60A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.6 Å

Loop

Sequence

GGG*CGAAAG*CCCUAAACGAUG*CC

Length

23 nucleotides

Bulged bases

9MTT|1|2a|A|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9MTT|1|2a|G|575
9MTT|1|2a|G|576
9MTT|1|2a|G|577
*
9MTT|1|2a|C|764
9MTT|1|2a|G|765
9MTT|1|2a|A|766
9MTT|1|2a|A|767
9MTT|1|2a|A|768
9MTT|1|2a|G|769
*
9MTT|1|2a|C|810
9MTT|1|2a|C|811
9MTT|1|2a|C|812
9MTT|1|2a|U|813
9MTT|1|2a|A|814
9MTT|1|2a|A|815
9MTT|1|2a|A|816
9MTT|1|2a|C|817
9MTT|1|2a|G|818
9MTT|1|2a|A|819
9MTT|1|2a|U|820
9MTT|1|2a|G|821
*
9MTT|1|2a|C|879
9MTT|1|2a|C|880

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2A

Large subunit ribosomal RNA; LSU rRNA

Chain 2h

30S ribosomal protein S8

Chain 2l

30S ribosomal protein S12

Chain 2o

30S ribosomal protein S15

Chain 2q

30S ribosomal protein S17