3D structure

PDB id
9O3I (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.8 Å

Loop

Sequence
GGG*CGAAAG*CCCUAAACGAUG*CC
Length
23 nucleotides
Bulged bases
9O3I|1|1a|A|815
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O3I|1|1a|G|575
9O3I|1|1a|G|576
9O3I|1|1a|G|577
*
9O3I|1|1a|C|764
9O3I|1|1a|G|765
9O3I|1|1a|A|766
9O3I|1|1a|A|767
9O3I|1|1a|A|768
9O3I|1|1a|G|769
*
9O3I|1|1a|C|810
9O3I|1|1a|C|811
9O3I|1|1a|C|812
9O3I|1|1a|U|813
9O3I|1|1a|A|814
9O3I|1|1a|A|815
9O3I|1|1a|A|816
9O3I|1|1a|C|817
9O3I|1|1a|G|818
9O3I|1|1a|A|819
9O3I|1|1a|U|820
9O3I|1|1a|G|821
*
9O3I|1|1a|C|879
9O3I|1|1a|C|880

Current chains

Chain 1a
16S Ribosomal RNA

Nearby chains

Chain 1A
Large subunit ribosomal RNA; LSU rRNA
Chain 1h
30S ribosomal protein S8
Chain 1l
30S ribosomal protein S12
Chain 1o
30S ribosomal protein S15
Chain 1q
30S ribosomal protein S17

Coloring options:

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