J4_9O3I_020

3D structure

PDB id

9O3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGUUC*GGUUAG*CU*ACCCGUAC

Length

21 nucleotides

Bulged bases

9O3I|1|2A|U|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3I|1|2A|G|1310
9O3I|1|2A|G|1311
9O3I|1|2A|U|1312
9O3I|1|2A|U|1313
9O3I|1|2A|C|1314
*
9O3I|1|2A|G|1338
9O3I|1|2A|G|1339
9O3I|1|2A|U|1340
9O3I|1|2A|U|1341
9O3I|1|2A|A|1342
9O3I|1|2A|G|1343
*
9O3I|1|2A|C|1404
9O3I|1|2A|U|1405
*
9O3I|1|2A|A|1597
9O3I|1|2A|C|1598
9O3I|1|2A|C|1599
9O3I|1|2A|C|1600
9O3I|1|2A|G|1601
9O3I|1|2A|U|1602
9O3I|1|2A|A|1603
9O3I|1|2A|C|1604

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 27

50S ribosomal protein L34

Chain 2X

50S ribosomal protein L23