J4_9O3I_028

3D structure

PDB id

9O3I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with ketolide telithromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAG*CAUGUG*CAAAG*CGC

Length

17 nucleotides

Bulged bases

9O3I|1|2a|A|197

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3I|1|2a|G|142
9O3I|1|2a|A|143
9O3I|1|2a|G|144
*
9O3I|1|2a|C|178
9O3I|1|2a|A|179
9O3I|1|2a|U|180
9O3I|1|2a|G|181
9O3I|1|2a|U|182
9O3I|1|2a|G|183
*
9O3I|1|2a|C|194
9O3I|1|2a|A|195
9O3I|1|2a|A|196
9O3I|1|2a|A|197
9O3I|1|2a|G|198
*
9O3I|1|2a|C|219
9O3I|1|2a|G|220
9O3I|1|2a|C|221

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2t

30S ribosomal protein S20