3D structure

PDB id
9O3K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, aminoacylated A-site Lys-tRNAlys, P-site fMAC-peptidyl-tRNAmet, and deacylated E-site tRNAlys at 2.70A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
UC*GGUUAG*CU*ACCCGUA
Length
17 nucleotides
Bulged bases
9O3K|1|1A|U|1341
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9O3K|1|1A|U|1313
9O3K|1|1A|C|1314
*
9O3K|1|1A|G|1338
9O3K|1|1A|G|1339
9O3K|1|1A|U|1340
9O3K|1|1A|U|1341
9O3K|1|1A|A|1342
9O3K|1|1A|G|1343
*
9O3K|1|1A|C|1404
9O3K|1|1A|U|1405
*
9O3K|1|1A|A|1597
9O3K|1|1A|C|1598
9O3K|1|1A|C|1599
9O3K|1|1A|C|1600
9O3K|1|1A|G|1601
9O3K|1|1A|U|1602
9O3K|1|1A|A|1603

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 17
50S ribosomal protein L34
Chain 1X
50S ribosomal protein L23

Coloring options:

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