J4_9O3L_027

3D structure

PDB id

9O3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolide erythromycin, mRNA, deacylated A-site tRNAphe, P-site fMRC-peptidyl-tRNAmet, and deacylated E-site tRNAphe at 2.75A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GAGUAACG*UC*GUAG*CC

Length

16 nucleotides

Bulged bases

9O3L|1|2a|C|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9O3L|1|2a|G|115
9O3L|1|2a|A|116
9O3L|1|2a|G|117
9O3L|1|2a|U|118
9O3L|1|2a|A|119
9O3L|1|2a|A|120
9O3L|1|2a|C|121
9O3L|1|2a|G|122
*
9O3L|1|2a|U|239
9O3L|1|2a|C|240
*
9O3L|1|2a|G|286
9O3L|1|2a|U|287
9O3L|1|2a|A|288
9O3L|1|2a|G|289
*
9O3L|1|2a|C|311
9O3L|1|2a|C|312

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2p

30S ribosomal protein S16

Chain 2q

30S ribosomal protein S17