3D structure

PDB id
9P76 (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ human eEF1A-A/T-P state 80S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GG*UGUGAA*UGGAAAG*UC
Length
17 nucleotides
Bulged bases
9P76|1|L5|A|2696
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9P76|1|L5|G|2618
9P76|1|L5|G|2619
*
9P76|1|L5|U|2637
9P76|1|L5|G|2638
9P76|1|L5|U|2639
9P76|1|L5|G|2640
9P76|1|L5|A|2641
9P76|1|L5|A|2642
*
9P76|1|L5|U|2692
9P76|1|L5|G|2693
9P76|1|L5|G|2694
9P76|1|L5|A|2695
9P76|1|L5|A|2696
9P76|1|L5|A|2697
9P76|1|L5|G|2698
*
9P76|1|L5|U|2718
9P76|1|L5|C|2719

Current chains

Chain L5
28S rRNA

Nearby chains

Chain LR
60S ribosomal protein L19
Chain LU
Heparin-binding protein HBp15
Chain Lg
60S ribosomal protein L34
Chain Lk
60S ribosomal protein L38

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.1142 s