J4_9P79_015

3D structure

PDB id

9P79 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human Hibernating rotate3 with Z site tRNA state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAUAG*CAU*AGGGUCC*GUU

Length

18 nucleotides

Bulged bases

9P79|1|Zt|U|8, 9P79|1|Zt|U|47, 9P79|1|Zt|C|48

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9P79|1|Zt|G|6
9P79|1|Zt|A|7
9P79|1|Zt|U|8
9P79|1|Zt|A|9
9P79|1|Zt|G|10
*
9P79|1|Zt|C|25
9P79|1|Zt|A|26
9P79|1|Zt|U|27
*
9P79|1|Zt|A|43
9P79|1|Zt|G|44
9P79|1|Zt|G|45
9P79|1|Zt|G|46
9P79|1|Zt|U|47
9P79|1|Zt|C|48
9P79|1|Zt|C|49
*
9P79|1|Zt|G|65
9P79|1|Zt|U|66
9P79|1|Zt|U|67

Current chains

Chain Zt

Z site tRNA

Nearby chains