J4_9PG8_006

3D structure

PDB id

9PG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the P-E state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.06 Å

Loop

Sequence

CAAG*CGUUCCAG*CAC*GAAACAG

Length

22 nucleotides

Bulged bases

9PG8|1|AA|U|711, 9PG8|1|AA|C|815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PG8|1|AA|C|698
9PG8|1|AA|A|699
9PG8|1|AA|A|700
9PG8|1|AA|G|701
*
9PG8|1|AA|C|708
9PG8|1|AA|G|709
9PG8|1|AA|U|710
9PG8|1|AA|U|711
9PG8|1|AA|C|712
9PG8|1|AA|C|713
9PG8|1|AA|A|714
9PG8|1|AA|G|715
*
9PG8|1|AA|C|800
9PG8|1|AA|A|801
9PG8|1|AA|C|802
*
9PG8|1|AA|G|811
9PG8|1|AA|A|812
9PG8|1|AA|A|813
9PG8|1|AA|A|814
9PG8|1|AA|C|815
9PG8|1|AA|A|816
9PG8|1|AA|G|817

Current chains

Chain AA

12S mitochondrial rRNA

Nearby chains

Chain A0

Small ribosomal subunit protein mS34

Chain AM

28S ribosomal protein S16, mitochondrial

Chain AU

28S ribosomal protein S26, mitochondrial

Chain L

39S ribosomal protein L14, mitochondrial