J4_9PGI_001

3D structure

PDB id

9PGI (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P-E state with TACO1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.02 Å

Loop

Sequence

CAUG*CU*AAAG*CAG

Length

13 nucleotides

Bulged bases

9PGI|1|A|U|2316, 9PGI|1|A|A|2452

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PGI|1|A|C|2314
9PGI|1|A|A|2315
9PGI|1|A|U|2316
9PGI|1|A|G|2317
*
9PGI|1|A|C|2326
9PGI|1|A|U|2327
*
9PGI|1|A|A|2450
9PGI|1|A|A|2451
9PGI|1|A|A|2452
9PGI|1|A|G|2453
*
9PGI|1|A|C|2671
9PGI|1|A|A|2672
9PGI|1|A|G|2673

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain O

39S ribosomal protein L17, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial

Chain s

39S ribosomal protein S30, mitochondrial