J4_9PJ8_002

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UU*GAUAGGA*UGGAAAG*CG

Length

18 nucleotides

Bulged bases

9PJ8|1|A|G|184, 9PJ8|1|A|A|213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ8|1|A|U|144
9PJ8|1|A|U|145
*
9PJ8|1|A|G|179
9PJ8|1|A|A|180
9PJ8|1|A|U|181
9PJ8|1|A|A|182
9PJ8|1|A|G|183
9PJ8|1|A|G|184
9PJ8|1|A|A|185
*
9PJ8|1|A|U|208
9PJ8|1|A|G|209
9PJ8|1|A|G|210
9PJ8|1|A|A|211
9PJ8|1|A|A|212
9PJ8|1|A|A|213
9PJ8|1|A|G|214
*
9PJ8|1|A|C|221
9PJ8|1|A|G|222

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20