J4_9PJ8_005

3D structure

PDB id

9PJ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Sarecycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*CAAG

Length

19 nucleotides

Bulged bases

9PJ8|1|a|U|322, 9PJ8|1|a|U|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ8|1|a|C|275
9PJ8|1|a|U|276
9PJ8|1|a|A|277
9PJ8|1|a|A|278
9PJ8|1|a|A|279
9PJ8|1|a|C|280
*
9PJ8|1|a|G|318
9PJ8|1|a|G|319
9PJ8|1|a|G|320
9PJ8|1|a|U|321
9PJ8|1|a|U|322
9PJ8|1|a|G|323
*
9PJ8|1|a|C|493
9PJ8|1|a|U|494
9PJ8|1|a|G|495
*
9PJ8|1|a|C|510
9PJ8|1|a|A|511
9PJ8|1|a|A|512
9PJ8|1|a|G|513

Current chains

Chain a

23S rRNA

Nearby chains